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PcMuORP1, an Oxathiapiprolin-Resistance Gene, Functions as a Novel Selection Marker for Phytophthora Transformation and CRISPR/Cas9 Mediated Genome Editing.

Identifieur interne : 000608 ( Main/Exploration ); précédent : 000607; suivant : 000609

PcMuORP1, an Oxathiapiprolin-Resistance Gene, Functions as a Novel Selection Marker for Phytophthora Transformation and CRISPR/Cas9 Mediated Genome Editing.

Auteurs : Weizhen Wang [République populaire de Chine] ; Zhaolin Xue [République populaire de Chine] ; Jianqiang Miao [République populaire de Chine] ; Meng Cai [République populaire de Chine] ; Can Zhang [République populaire de Chine] ; Tengjiao Li [République populaire de Chine] ; Borui Zhang [République populaire de Chine] ; Brett M. Tyler [États-Unis] ; Xili Liu [République populaire de Chine]

Source :

RBID : pubmed:31708886

Abstract

Phytophthora, a genus of oomycetes, contains many devastating plant pathogens, which cause substantial economic losses worldwide. Recently, CRISPR/Cas9-based genome editing tool was introduced into Phytophthora to delineate the functionality of individual genes. The available selection markers for Phytophthora transformation, however, are limited, which can restrain transgenic manipulation in some cases. We hypothesized that PcMuORP1, an endogenous fungicide resistance gene from P. capsici that confers resistance to the fungicide oxathiapiprolin via an altered target site in the ORP1 protein, could be used as an alternative marker. To test this hypothesis, the gene PcMuORP1 was introduced into the CRISPR/Cas9 system and complementation of a deleted gene in P. capsici was achieved using it as a selection marker. All of the oxathiapiprolin-resistant transformants were confirmed to contain the marker gene, indicating that the positive screening rate was 100%. The novel selection marker could also be used in other representative Phytophthora species including P. sojae and P. litchii, also with 100% positive screening rate. Furthermore, comparative studies indicated that use of PcMuORP1 resulted in a much higher efficiency of screening compared to the conventional selection marker NPT II, especially in P. capsici. Successive subculture and asexual reproduction in the absence of selective pressure were found to result in the loss of the selection marker from the transformants, which indicates that the PcMuORP1 gene would have little long term influence on the fitness of transformants and could be reused as the selection marker in subsequent projects. Thus, we have created an alternative selection marker for Phytophthora transformation by using a fungicide resistance gene, which would accelerate functional studies of genes in these species.

DOI: 10.3389/fmicb.2019.02402
PubMed: 31708886
PubMed Central: PMC6821980


Affiliations:


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Le document en format XML

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, an Oxathiapiprolin-Resistance Gene, Functions as a Novel Selection Marker for
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Transformation and CRISPR/Cas9 Mediated Genome Editing.</title>
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, an Oxathiapiprolin-Resistance Gene, Functions as a Novel Selection Marker for
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Transformation and CRISPR/Cas9 Mediated Genome Editing.</title>
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<div type="abstract" xml:lang="en">
<i>Phytophthora</i>
, a genus of oomycetes, contains many devastating plant pathogens, which cause substantial economic losses worldwide. Recently, CRISPR/Cas9-based genome editing tool was introduced into
<i>Phytophthora</i>
to delineate the functionality of individual genes. The available selection markers for
<i>Phytophthora</i>
transformation, however, are limited, which can restrain transgenic manipulation in some cases. We hypothesized that
<i>PcMuORP1</i>
, an endogenous fungicide resistance gene from
<i>P. capsici</i>
that confers resistance to the fungicide oxathiapiprolin via an altered target site in the ORP1 protein, could be used as an alternative marker. To test this hypothesis, the gene
<i>PcMuORP1</i>
was introduced into the CRISPR/Cas9 system and complementation of a deleted gene in
<i>P. capsici</i>
was achieved using it as a selection marker. All of the oxathiapiprolin-resistant transformants were confirmed to contain the marker gene, indicating that the positive screening rate was 100%. The novel selection marker could also be used in other representative
<i>Phytophthora</i>
species including
<i>P. sojae</i>
and
<i>P. litchii</i>
, also with 100% positive screening rate. Furthermore, comparative studies indicated that use of
<i>PcMuORP1</i>
resulted in a much higher efficiency of screening compared to the conventional selection marker
<i>NPT II</i>
, especially in
<i>P. capsici.</i>
Successive subculture and asexual reproduction in the absence of selective pressure were found to result in the loss of the selection marker from the transformants, which indicates that the
<i>PcMuORP1</i>
gene would have little long term influence on the fitness of transformants and could be reused as the selection marker in subsequent projects. Thus, we have created an alternative selection marker for
<i>Phytophthora</i>
transformation by using a fungicide resistance gene, which would accelerate functional studies of genes in these species.</div>
</front>
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<i>PcMuORP1</i>
, an Oxathiapiprolin-Resistance Gene, Functions as a Novel Selection Marker for
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Transformation and CRISPR/Cas9 Mediated Genome Editing.</ArticleTitle>
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<i>Phytophthora</i>
, a genus of oomycetes, contains many devastating plant pathogens, which cause substantial economic losses worldwide. Recently, CRISPR/Cas9-based genome editing tool was introduced into
<i>Phytophthora</i>
to delineate the functionality of individual genes. The available selection markers for
<i>Phytophthora</i>
transformation, however, are limited, which can restrain transgenic manipulation in some cases. We hypothesized that
<i>PcMuORP1</i>
, an endogenous fungicide resistance gene from
<i>P. capsici</i>
that confers resistance to the fungicide oxathiapiprolin via an altered target site in the ORP1 protein, could be used as an alternative marker. To test this hypothesis, the gene
<i>PcMuORP1</i>
was introduced into the CRISPR/Cas9 system and complementation of a deleted gene in
<i>P. capsici</i>
was achieved using it as a selection marker. All of the oxathiapiprolin-resistant transformants were confirmed to contain the marker gene, indicating that the positive screening rate was 100%. The novel selection marker could also be used in other representative
<i>Phytophthora</i>
species including
<i>P. sojae</i>
and
<i>P. litchii</i>
, also with 100% positive screening rate. Furthermore, comparative studies indicated that use of
<i>PcMuORP1</i>
resulted in a much higher efficiency of screening compared to the conventional selection marker
<i>NPT II</i>
, especially in
<i>P. capsici.</i>
Successive subculture and asexual reproduction in the absence of selective pressure were found to result in the loss of the selection marker from the transformants, which indicates that the
<i>PcMuORP1</i>
gene would have little long term influence on the fitness of transformants and could be reused as the selection marker in subsequent projects. Thus, we have created an alternative selection marker for
<i>Phytophthora</i>
transformation by using a fungicide resistance gene, which would accelerate functional studies of genes in these species.</AbstractText>
<CopyrightInformation>Copyright © 2019 Wang, Xue, Miao, Cai, Zhang, Li, Zhang, Tyler and Liu.</CopyrightInformation>
</Abstract>
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<LastName>Wang</LastName>
<ForeName>Weizhen</ForeName>
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<Affiliation>Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China.</Affiliation>
</AffiliationInfo>
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<LastName>Xue</LastName>
<ForeName>Zhaolin</ForeName>
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<Affiliation>Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China.</Affiliation>
</AffiliationInfo>
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</AffiliationInfo>
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</AffiliationInfo>
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</AffiliationInfo>
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<Affiliation>Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China.</Affiliation>
</AffiliationInfo>
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<AffiliationInfo>
<Affiliation>Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China.</Affiliation>
</AffiliationInfo>
</Author>
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<Initials>BM</Initials>
<AffiliationInfo>
<Affiliation>Center for Genome Research and Biocomputing, Oregon State University, Corvallis, OR, United States.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, United States.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Liu</LastName>
<ForeName>Xili</ForeName>
<Initials>X</Initials>
<AffiliationInfo>
<Affiliation>Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University, Yangling, China.</Affiliation>
</AffiliationInfo>
</Author>
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</PublicationTypeList>
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<Year>2019</Year>
<Month>10</Month>
<Day>22</Day>
</ArticleDate>
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<Country>Switzerland</Country>
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<KeywordList Owner="NOTNLM">
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